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kb

Behavior:

  • Prints embedded documentation and knowledge bases.
  • Extracts built-in files to stdout or a specified output directory.

Available Documents:

  • bac120 - 120 bacterial marker genes (tar.gz archive)
  • ar53 - 53 archaeal marker genes (tar.gz archive)

Output:

  • Archive files (bac120, ar53) are extracted to the specified directory.
  • By default, files are extracted to the current directory.
  • Use --outdir to specify an output directory.

Examples:

  1. Extract bacterial marker genes nwr kb bac120 --outdir marker_genes/

  2. Extract archaeal marker genes nwr kb ar53 --outdir marker_genes/